The Huttenhower Lab

Book Chapters

1. P. Sarder, W. Zhang, J. P. Cobb, and A. Nehorai, "Gene reachability using page ranking on gene co-expression networks," to appear in Link Mining: Models, Algorithms, and Applications, (Ch. 21, P. S. Yu, C. Faloutsos, and J. Han, Eds.), Springer.

Journal Papers

1. P. Sarder and A. Nehorai, "Deconvolution methods for 3D fluorescence microscopy images: An overview," IEEE Signal Processing Magazine, vol. 23, no. 3, pp. 32-45, May 2006.
2. P. Sarder, A. Nehorai, P. H. Davis, and S. Stanley, "Estimating gene signals from noisy microarray images," IEEE Trans. on NanoBioscience, vol. 7, no. 2, pp. 142-153, June 2008.
3. P. Sarder and A. Nehorai, "Estimating locations of quantum-dot–encoded microparticles from ultra-high density 3D microarrays," IEEE Trans. on NanoBioscience, vol. 7, no. 4, pp. 284-297, Dec. 2008.
4. P. Sarder, W. Schierding, J. P. Cobb, and A. Nehorai, "Estimating sparse gene regulatory networks using a Bayesian linear regression," IEEE Trans. on NanoBioscience, vol. 9, no. 2, pp. 121-131, June 2010.
5. P. Sarder and A. Nehorai, "Statistical Design of Position-Encoded 3D Microarrays," in revision for IEEE Trans. on NanoBioscience.

Conference Papers

1. P. Sarder and A. Nehorai, "Performance analysis of quantifying fluorescence of target-captured microparticles from microscopy images," Proc. Fourth IEEE Workshop on Sensor Array and Multi-channel Processing, pp. 289-293, Waltham, Massachusetts, USA, Jul. 2006.
2. P. Sarder and A. Nehorai, "Statistical design of a 3D microarray with position-encoded microspheres," Proc. Third International Workshop on Computational Advances in Multi-Sensor Adaptive Processing (CAMSAP), pp. 161-164, Aruba, Dutch Antilles, Dec. 2009.

Conference Abstracts

1. P. Sarder, N. Segata, D. Gevers, J. Izard, and C. Huttenhower, "Functional understanding of microbial communities using experimental data integration," 2010 Human Microbiome Research Conference, St. Louis, Missouri, USA, Aug. 31 to Sep. 2, 2010.